Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm23071-201ENSMUST00000158242 115 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm27299-201ENSMUST00000184593 103 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm43828-201ENSMUST00000196890 639 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 AC154213.2-201ENSMUST00000227138 187 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm22950-201ENSMUST00000082776 107 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm24449-201ENSMUST00000083985 106 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Gm37639-201ENSMUST00000191623 2785 ntBASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Msh5Q9QUM7 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm26051-201ENSMUST00000104642 93 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm14591-201ENSMUST00000120407 518 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm12175-201ENSMUST00000122081 345 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm3810-201ENSMUST00000122413 476 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm24926-201ENSMUST00000178053 79 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm22632-201ENSMUST00000178266 79 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm8009-201ENSMUST00000191672 436 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm37103-201ENSMUST00000191830 115 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm38291-201ENSMUST00000193671 259 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm37380-201ENSMUST00000193752 397 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm7019-201ENSMUST00000194122 369 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm36382-201ENSMUST00000198892 541 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC152979.1-201ENSMUST00000218214 289 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm40692-201ENSMUST00000220411 491 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm18628-201ENSMUST00000220584 475 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm24697-201ENSMUST00000083881 107 ntBASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh5Q9QUM7 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm36960-201ENSMUST00000195491 2035 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm26500-201ENSMUST00000101867 106 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm13581-201ENSMUST00000120675 278 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm13642-201ENSMUST00000121697 381 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm12094-201ENSMUST00000121781 472 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm11204-201ENSMUST00000122438 147 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm5958-201ENSMUST00000147698 297 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm24916-201ENSMUST00000157287 79 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm23640-201ENSMUST00000157860 104 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm23260-201ENSMUST00000158317 172 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm7452-201ENSMUST00000200764 788 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm43798-201ENSMUST00000202056 394 ntBASIC6.47□□□□□ -1.37
Msh5Q9QUM7 Gm43459-201ENSMUST00000202093 331 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms