Protein–RNA interactions for Protein: Q9QUK3

Cln8, Protein CLN8, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8Q9QUK3 Gm14656-201ENSMUST00000120342 502 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm6079-201ENSMUST00000121356 404 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm24961-201ENSMUST00000157918 184 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm25369-201ENSMUST00000158848 132 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm20526-201ENSMUST00000173416 158 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm20542-201ENSMUST00000174582 372 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm36934-201ENSMUST00000192007 306 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm37708-201ENSMUST00000192337 895 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm17967-201ENSMUST00000195319 647 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm2314-201ENSMUST00000200391 586 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm44583-201ENSMUST00000207478 281 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm25205-201ENSMUST00000082841 103 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm22575-201ENSMUST00000082981 110 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Snord15a-201ENSMUST00000083888 148 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cln8Q9QUK3 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm12427-201ENSMUST00000117719 302 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm15268-201ENSMUST00000118845 352 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm13009-201ENSMUST00000121307 267 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm13973-201ENSMUST00000121371 894 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm11344-201ENSMUST00000122011 335 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm17164-201ENSMUST00000169013 506 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm8600-201ENSMUST00000186320 905 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm37098-201ENSMUST00000192290 244 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm37290-201ENSMUST00000195775 339 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm42926-201ENSMUST00000200496 697 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Mir132-201ENSMUST00000083603 66 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cln8Q9QUK3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm11869-201ENSMUST00000118701 329 ntBASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm11704-201ENSMUST00000120031 214 ntBASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm22339-201ENSMUST00000157718 62 ntBASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cln8Q9QUK3 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms