Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm12954-201ENSMUST00000118610 611 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm9119-201ENSMUST00000118866 495 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Mir3106-201ENSMUST00000175401 82 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm22392-201ENSMUST00000177971 107 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm27648-201ENSMUST00000184315 107 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm27899-201ENSMUST00000184715 64 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm5829-201ENSMUST00000191383 351 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm43441-201ENSMUST00000201458 205 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm44795-201ENSMUST00000205496 319 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm18320-201ENSMUST00000211304 595 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm34005-201ENSMUST00000215834 282 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm24117-201ENSMUST00000103973 133 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm24318-201ENSMUST00000104490 131 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm14628-201ENSMUST00000117508 635 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm12509-201ENSMUST00000118033 609 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm11429-201ENSMUST00000119089 144 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm15037-201ENSMUST00000120358 259 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm25883-201ENSMUST00000157781 271 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm16589-201ENSMUST00000159522 918 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm17155-201ENSMUST00000165969 473 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm13249-201ENSMUST00000177803 345 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm6947-201ENSMUST00000186254 78 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm29428-201ENSMUST00000190086 409 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm17935-201ENSMUST00000196649 772 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm9379-201ENSMUST00000196790 646 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm18660-201ENSMUST00000199542 629 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm4045-201ENSMUST00000204076 310 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Gm25699-201ENSMUST00000082896 167 ntBASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trem1Q9JKE2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Trem1Q9JKE2 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.34□□□□□ -1.88
Trem1Q9JKE2 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Trem1Q9JKE2 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.34□□□□□ -1.88
Trem1Q9JKE2 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm26367-201ENSMUST00000104165 132 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm11366-201ENSMUST00000119279 429 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm12383-201ENSMUST00000120628 760 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm22453-201ENSMUST00000122801 318 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm23465-201ENSMUST00000157134 262 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm19203-201ENSMUST00000174049 939 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm27568-201ENSMUST00000184220 99 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm27387-201ENSMUST00000184583 116 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm43489-201ENSMUST00000196810 993 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Trdv3-201ENSMUST00000198551 309 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm44404-201ENSMUST00000203979 636 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trem1Q9JKE2 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms