Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm23256-201ENSMUST00000102235 110 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm26140-201ENSMUST00000103807 110 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm22890-201ENSMUST00000158642 144 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm20693-201ENSMUST00000177431 211 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm22908-201ENSMUST00000177620 110 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm14527-201ENSMUST00000179300 639 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Mir6715-201ENSMUST00000184990 57 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28574-201ENSMUST00000185757 699 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28781-201ENSMUST00000185760 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28339-201ENSMUST00000185845 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29062-201ENSMUST00000186032 694 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29574-201ENSMUST00000186226 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm8600-201ENSMUST00000186320 905 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28828-201ENSMUST00000186601 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28057-201ENSMUST00000186603 615 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28255-201ENSMUST00000187101 694 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29307-201ENSMUST00000187367 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28397-201ENSMUST00000187970 699 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28896-201ENSMUST00000188609 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29545-201ENSMUST00000188878 694 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29339-201ENSMUST00000189613 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm28159-201ENSMUST00000190296 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29366-201ENSMUST00000190481 699 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm29407-201ENSMUST00000191468 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm37433-201ENSMUST00000192695 678 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm37441-201ENSMUST00000194430 678 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm38107-201ENSMUST00000194873 696 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm8023-201ENSMUST00000195298 903 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm43894-201ENSMUST00000203274 688 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm18194-201ENSMUST00000210455 481 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm25205-201ENSMUST00000082841 103 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Snora31-201ENSMUST00000083213 130 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm25581-201ENSMUST00000083410 164 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.39□□□□□ -1.87
Cdc40Q9DC48 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm14050-201ENSMUST00000117052 346 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm16005-201ENSMUST00000120515 269 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm16471-201ENSMUST00000121940 618 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm42438-201ENSMUST00000197832 974 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm44232-201ENSMUST00000204537 225 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm44849-201ENSMUST00000207595 484 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm19219-201ENSMUST00000215863 724 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm3565-201ENSMUST00000222670 609 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Mir193a-201ENSMUST00000083461 66 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdc40Q9DC48 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.38□□□□□ -1.87
Cdc40Q9DC48 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdc40Q9DC48 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.37□□□□□ -1.87
Cdc40Q9DC48 Gm24127-201ENSMUST00000104110 130 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms