Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm45689-201ENSMUST00000210522 133 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm34005-201ENSMUST00000215834 282 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm12902-201ENSMUST00000118389 322 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm11598-201ENSMUST00000119257 357 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm11387-201ENSMUST00000120266 772 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13460-201ENSMUST00000121274 353 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13459-201ENSMUST00000121558 646 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm12358-201ENSMUST00000121842 520 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14905-201ENSMUST00000122351 639 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm25295-201ENSMUST00000122794 306 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm4725-201ENSMUST00000151048 587 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm18604-201ENSMUST00000172535 558 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm15143-201ENSMUST00000178180 714 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm27427-201ENSMUST00000185134 193 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm42832-201ENSMUST00000196361 745 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm5983-201ENSMUST00000197739 770 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm43217-201ENSMUST00000199513 367 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm19039-201ENSMUST00000204363 575 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm44600-201ENSMUST00000208540 111 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc3Q9D6Y1 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22023-201ENSMUST00000104354 130 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6274-201ENSMUST00000118173 797 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm11483-201ENSMUST00000119839 247 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6461-201ENSMUST00000120015 633 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13366-201ENSMUST00000122198 970 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm2892-201ENSMUST00000145537 711 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm16101-201ENSMUST00000160695 430 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22108-201ENSMUST00000177961 106 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm24798-201ENSMUST00000179334 106 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm27535-201ENSMUST00000183814 157 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm37575-201ENSMUST00000195467 309 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm43308-201ENSMUST00000197236 373 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm35876-201ENSMUST00000205044 459 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm336-201ENSMUST00000186376 1480 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.38□□□□□ -1.87
Ccdc3Q9D6Y1 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm25376-201ENSMUST00000104340 133 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm5762-201ENSMUST00000119204 258 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14926-201ENSMUST00000120650 508 ntBASIC3.37□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13009-201ENSMUST00000121307 267 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms