Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm24069-201ENSMUST00000104512 127 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm11256-201ENSMUST00000118109 829 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm14018-201ENSMUST00000119042 455 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm12231-201ENSMUST00000119447 695 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm12438-201ENSMUST00000122034 336 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm14775-201ENSMUST00000122089 310 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm15147-201ENSMUST00000122263 483 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm23872-201ENSMUST00000175432 77 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm24300-201ENSMUST00000177809 109 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm24017-201ENSMUST00000178726 109 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm23952-201ENSMUST00000179380 109 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Mir6382-201ENSMUST00000184055 110 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm27148-201ENSMUST00000185086 160 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm19641-201ENSMUST00000188432 417 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm44011-201ENSMUST00000203336 394 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm45105-201ENSMUST00000207824 397 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm46327-201ENSMUST00000218240 365 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Snord47-201ENSMUST00000083034 77 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm22155-201ENSMUST00000083836 162 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim42Q9D2H5 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm12255-201ENSMUST00000117184 284 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm13428-201ENSMUST00000117540 365 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm5384-201ENSMUST00000120313 463 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm26412-201ENSMUST00000157666 55 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm9830-201ENSMUST00000178509 357 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm8807-201ENSMUST00000179328 492 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm37659-201ENSMUST00000194574 111 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm44419-201ENSMUST00000203338 229 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm45724-201ENSMUST00000213031 420 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm3086-202ENSMUST00000221248 310 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm23502-201ENSMUST00000083902 145 ntBASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim42Q9D2H5 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm24272-201ENSMUST00000102329 98 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm23744-201ENSMUST00000104231 149 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm12137-201ENSMUST00000119565 346 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm14240-201ENSMUST00000120353 546 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm7670-201ENSMUST00000121272 641 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm25013-201ENSMUST00000158402 128 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm16102-201ENSMUST00000160955 420 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm22263-201ENSMUST00000180060 104 ntBASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim42Q9D2H5 Gm45313-201ENSMUST00000210584 178 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms