Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26320-201ENSMUST00000157742 306 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm23205-201ENSMUST00000158671 103 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Mir6408-201ENSMUST00000183643 91 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm37239-201ENSMUST00000193510 141 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm29704-201ENSMUST00000196011 253 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm43214-201ENSMUST00000199242 352 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm20039-201ENSMUST00000210329 394 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm18225-201ENSMUST00000216708 742 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm8249-201ENSMUST00000219225 465 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm8274-201ENSMUST00000219820 463 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm8785-201ENSMUST00000220259 487 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Mir325-201ENSMUST00000083491 98 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm11403-201ENSMUST00000122195 369 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm23591-201ENSMUST00000157663 286 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm26487-201ENSMUST00000158022 94 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm27580-201ENSMUST00000183666 149 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm27233-201ENSMUST00000184030 307 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm38356-201ENSMUST00000194313 408 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm8023-201ENSMUST00000195298 903 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm17887-201ENSMUST00000200194 547 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm44611-201ENSMUST00000207507 355 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm5358-201ENSMUST00000212814 353 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.22□□□□□ -1.73
Smc1aQ9CU62 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.22□□□□□ -1.73
Smc1aQ9CU62 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Smc1aQ9CU62 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Smc1aQ9CU62 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Smc1aQ9CU62 Gm14050-201ENSMUST00000117052 346 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm12568-201ENSMUST00000117362 624 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm16383-201ENSMUST00000118122 232 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm24537-201ENSMUST00000157950 102 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm23824-201ENSMUST00000158741 276 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm5929-201ENSMUST00000166883 487 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm14527-201ENSMUST00000179300 639 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm37097-201ENSMUST00000193676 336 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm17937-201ENSMUST00000197908 742 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm44099-201ENSMUST00000203299 112 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm45226-201ENSMUST00000206602 288 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm45553-201ENSMUST00000209929 507 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm25481-201ENSMUST00000083221 158 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Smc1aQ9CU62 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm23697-201ENSMUST00000103897 110 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm24318-201ENSMUST00000104490 131 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm11708-201ENSMUST00000119530 832 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm11260-201ENSMUST00000121163 942 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm22107-201ENSMUST00000122548 100 ntBASIC4.2□□□□□ -1.74
Smc1aQ9CU62 Gm22480-201ENSMUST00000122568 128 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms