Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm25598-201ENSMUST00000179031 107 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm34091-201ENSMUST00000200875 604 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm43415-201ENSMUST00000201934 750 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm18016-201ENSMUST00000216119 801 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm5518-201ENSMUST00000084171 648 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm8074-201ENSMUST00000095071 252 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Use1Q9CQ56 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.42□□□□□ -1.86
Use1Q9CQ56 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm22272-201ENSMUST00000104039 134 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm11393-201ENSMUST00000118019 288 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm7219-201ENSMUST00000119619 297 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm13273-201ENSMUST00000119737 159 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm5942-201ENSMUST00000120046 439 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm12515-201ENSMUST00000120116 361 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm16100-201ENSMUST00000120489 231 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm14768-201ENSMUST00000122126 678 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm24244-201ENSMUST00000157317 130 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm26000-201ENSMUST00000157991 107 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm23505-201ENSMUST00000158989 130 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm18604-201ENSMUST00000172535 558 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm10292-201ENSMUST00000183142 581 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Mir6414-201ENSMUST00000183685 82 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm28615-201ENSMUST00000187527 482 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm7897-201ENSMUST00000193981 554 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm3189-201ENSMUST00000205595 832 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm45209-201ENSMUST00000207122 353 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Gm23447-201ENSMUST00000082798 163 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Use1Q9CQ56 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Use1Q9CQ56 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Use1Q9CQ56 Gm22269-201ENSMUST00000104002 130 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm22019-201ENSMUST00000104359 96 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm16383-201ENSMUST00000118122 232 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm13080-201ENSMUST00000120556 420 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm13487-201ENSMUST00000122240 864 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm5527-201ENSMUST00000179821 642 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm19080-201ENSMUST00000196082 550 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm43559-201ENSMUST00000198755 466 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm19232-201ENSMUST00000211621 652 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Use1Q9CQ56 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm23975-201ENSMUST00000082685 106 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Gm23846-201ENSMUST00000083835 107 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Olfr203-201ENSMUST00000089305 924 ntBASIC3.4□□□□□ -1.87
Use1Q9CQ56 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms