Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28886-202ENSMUST00000187889 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28554-202ENSMUST00000189175 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29213-202ENSMUST00000189703 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28851-202ENSMUST00000189757 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28506-201ENSMUST00000189937 150 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28461-201ENSMUST00000190023 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37882-201ENSMUST00000195254 196 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm19195-201ENSMUST00000222018 511 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm25929-201ENSMUST00000082784 107 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm25579-201ENSMUST00000083407 106 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Mir449a-201ENSMUST00000083641 91 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Olfr713-201ENSMUST00000098139 975 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm24789-201ENSMUST00000104282 131 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm6797-201ENSMUST00000119440 512 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm15387-201ENSMUST00000120421 648 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm11197-201ENSMUST00000145158 839 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm23993-201ENSMUST00000157478 144 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm24499-201ENSMUST00000158446 104 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm29475-201ENSMUST00000190767 312 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm10048-201ENSMUST00000194196 372 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm5842-201ENSMUST00000195073 622 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm43215-201ENSMUST00000199108 252 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm45023-201ENSMUST00000207951 379 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm6012-201ENSMUST00000210821 730 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm45422-201ENSMUST00000211476 246 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gm5518-201ENSMUST00000084171 648 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms