Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm23313-201ENSMUST00000178931 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm23089-201ENSMUST00000178947 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm25285-201ENSMUST00000178951 90 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm22046-201ENSMUST00000179027 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm24153-201ENSMUST00000179280 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm25597-201ENSMUST00000179388 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm22941-201ENSMUST00000179630 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm22631-201ENSMUST00000179656 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm25816-201ENSMUST00000179764 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm26188-201ENSMUST00000179963 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm25471-201ENSMUST00000180126 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm26433-201ENSMUST00000180227 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm23862-201ENSMUST00000180342 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm22128-201ENSMUST00000180346 94 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm37882-201ENSMUST00000195254 196 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm44048-201ENSMUST00000204531 361 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm32536-201ENSMUST00000205209 445 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm6112-201ENSMUST00000208037 629 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm23875-201ENSMUST00000083711 318 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim8Q99PJ2 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm23746-201ENSMUST00000104229 125 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm14575-201ENSMUST00000117210 560 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm12607-201ENSMUST00000120724 493 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm22452-201ENSMUST00000122804 104 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm22491-201ENSMUST00000157190 102 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm23993-201ENSMUST00000157478 144 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm22101-201ENSMUST00000157928 103 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm15914-201ENSMUST00000161922 309 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm25284-201ENSMUST00000180345 141 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm27355-201ENSMUST00000185045 128 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm37421-201ENSMUST00000193088 132 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm18602-201ENSMUST00000209794 851 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm18924-201ENSMUST00000211929 316 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm5917-201ENSMUST00000217638 721 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms