Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm11804-201ENSMUST00000121663 468 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm13406-201ENSMUST00000121991 256 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm25293-201ENSMUST00000122792 285 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm22755-201ENSMUST00000157143 100 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm23121-201ENSMUST00000157653 173 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm24402-201ENSMUST00000157873 91 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm26001-201ENSMUST00000157989 103 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm22769-201ENSMUST00000158367 98 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm17081-201ENSMUST00000167363 478 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm20701-201ENSMUST00000176082 347 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Mir6343-201ENSMUST00000183584 84 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm27492-201ENSMUST00000185194 187 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm38044-201ENSMUST00000192964 487 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm43015-201ENSMUST00000199087 565 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm43794-201ENSMUST00000200971 692 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm19649-201ENSMUST00000201126 822 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm44261-201ENSMUST00000203337 209 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm45614-201ENSMUST00000209994 721 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm9269-201ENSMUST00000221661 578 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm9512-201ENSMUST00000223112 497 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm5215-201ENSMUST00000054380 405 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Mir338-201ENSMUST00000083666 98 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm22155-201ENSMUST00000083836 162 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.06□□□□□ -1.76
H1fooQ8VIK3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm23744-201ENSMUST00000104231 149 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm13804-201ENSMUST00000119552 172 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm12486-201ENSMUST00000120887 541 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm26045-201ENSMUST00000157862 97 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm8224-201ENSMUST00000166178 497 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm17183-201ENSMUST00000171170 493 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Npn2-202ENSMUST00000189275 235 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm44295-201ENSMUST00000203805 437 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm45660-201ENSMUST00000210267 151 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm6056-201ENSMUST00000221253 488 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm7040-201ENSMUST00000223271 443 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm18441-201ENSMUST00000223539 617 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm24166-201ENSMUST00000082724 135 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm23514-201ENSMUST00000082827 130 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm22740-201ENSMUST00000083439 109 ntBASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
H1fooQ8VIK3 BC051076-202ENSMUST00000199477 2868 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms