Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Gm29950-201ENSMUST00000195273 237 ntBASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Gm18194-201ENSMUST00000210455 481 ntBASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Gm45735-201ENSMUST00000212779 319 ntBASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc87Q8CDL9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Ccdc87Q8CDL9 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ccdc87Q8CDL9 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm12568-201ENSMUST00000117362 624 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm14107-201ENSMUST00000117774 330 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm11352-201ENSMUST00000119264 517 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm15266-201ENSMUST00000119635 255 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm13737-201ENSMUST00000119793 232 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm13000-201ENSMUST00000120937 496 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm25334-201ENSMUST00000158036 110 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm43309-201ENSMUST00000200837 458 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm44125-201ENSMUST00000203068 448 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc87Q8CDL9 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm22771-201ENSMUST00000104449 91 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm12328-201ENSMUST00000118611 197 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm14906-201ENSMUST00000119265 390 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm12770-201ENSMUST00000121734 462 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm12755-201ENSMUST00000122297 282 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm2020-201ENSMUST00000145242 579 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm23902-201ENSMUST00000157571 134 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm25883-201ENSMUST00000157781 271 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm25224-201ENSMUST00000158195 68 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm23312-201ENSMUST00000158774 102 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm24897-201ENSMUST00000179033 107 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm27875-201ENSMUST00000184425 123 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Mir6933-201ENSMUST00000184982 81 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm18185-201ENSMUST00000186725 667 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm29045-201ENSMUST00000187278 698 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm37771-201ENSMUST00000193121 265 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm44389-201ENSMUST00000203795 182 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm7117-201ENSMUST00000071515 387 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc87Q8CDL9 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc87Q8CDL9 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms