Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm20399-201ENSMUST00000174652 132 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm25817-201ENSMUST00000177758 121 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm24766-201ENSMUST00000179182 121 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm27033-201ENSMUST00000183226 544 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm27773-201ENSMUST00000184087 78 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm29038-201ENSMUST00000191543 678 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm37418-201ENSMUST00000195031 274 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm5309-201ENSMUST00000197416 677 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Mir7682-201ENSMUST00000198467 58 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm4859-201ENSMUST00000199625 787 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm44059-201ENSMUST00000204048 351 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm25592-201ENSMUST00000082635 131 ntBASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup54Q8BTS4 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm26075-201ENSMUST00000104062 121 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm25317-201ENSMUST00000116824 129 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm11704-201ENSMUST00000120031 214 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm13676-201ENSMUST00000122185 591 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm22345-201ENSMUST00000122644 107 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm24059-201ENSMUST00000157493 312 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm23387-201ENSMUST00000158586 107 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm16303-201ENSMUST00000161498 390 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm5929-201ENSMUST00000166883 487 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm9890-201ENSMUST00000171867 537 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm27427-201ENSMUST00000185134 193 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm44703-201ENSMUST00000205724 248 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm18585-201ENSMUST00000215197 556 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm18120-201ENSMUST00000220079 511 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm4036-201ENSMUST00000220842 626 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm7119-201ENSMUST00000221345 695 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Snord15a-201ENSMUST00000083888 148 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.79□□□□□ -1.8
Nup54Q8BTS4 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm15180-201ENSMUST00000117745 492 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm16100-201ENSMUST00000120489 231 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm16005-201ENSMUST00000120515 269 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm13419-201ENSMUST00000121711 271 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm23540-201ENSMUST00000157543 164 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm24998-201ENSMUST00000157908 89 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm22890-201ENSMUST00000158642 144 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm24875-201ENSMUST00000158888 104 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm27903-201ENSMUST00000175482 126 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm18397-201ENSMUST00000176704 587 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm22252-201ENSMUST00000179316 79 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm28010-201ENSMUST00000179485 126 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm27580-201ENSMUST00000183666 149 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm7897-201ENSMUST00000193981 554 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Gm37617-201ENSMUST00000194309 159 ntBASIC3.78□□□□□ -1.8
Nup54Q8BTS4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms