Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Mir6906-201ENSMUST00000198998 58 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Mir219c-201ENSMUST00000199860 60 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm45200-201ENSMUST00000207434 919 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 LOC665443-201ENSMUST00000212284 796 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm19195-201ENSMUST00000222018 511 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm23741-201ENSMUST00000097237 171 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm14890-201ENSMUST00000117660 676 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm2066-201ENSMUST00000118046 389 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm11774-201ENSMUST00000118601 293 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm12303-201ENSMUST00000119506 673 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm12379-201ENSMUST00000119607 391 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm8880-201ENSMUST00000121800 454 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm25624-201ENSMUST00000157222 275 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm22916-201ENSMUST00000157616 119 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm23225-201ENSMUST00000158121 114 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm16114-201ENSMUST00000161930 300 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm26622-201ENSMUST00000180520 298 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm27030-201ENSMUST00000182551 464 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm19243-201ENSMUST00000198592 269 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm19726-201ENSMUST00000205008 240 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm46327-201ENSMUST00000218240 365 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm22577-201ENSMUST00000083731 109 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm25937-201ENSMUST00000083912 107 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubp1Q811S7 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.47□□□□□ -1.53
Ubp1Q811S7 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.46□□□□□ -1.53
Ubp1Q811S7 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ubp1Q811S7 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ubp1Q811S7 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.46□□□□□ -1.53
Ubp1Q811S7 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.46□□□□□ -1.53
Ubp1Q811S7 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ubp1Q811S7 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ubp1Q811S7 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm22592-201ENSMUST00000104242 131 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm15148-201ENSMUST00000117602 156 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm15147-201ENSMUST00000122263 483 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm25291-201ENSMUST00000122795 144 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm23542-201ENSMUST00000158208 96 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm22769-201ENSMUST00000158367 98 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm22891-201ENSMUST00000158641 164 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm8580-201ENSMUST00000160295 464 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Mir3572-201ENSMUST00000175549 86 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm26970-201ENSMUST00000182990 964 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm28860-201ENSMUST00000188103 313 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm38015-201ENSMUST00000193048 188 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm37167-201ENSMUST00000194946 396 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms