Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm12765-201ENSMUST00000117273 615 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm12328-201ENSMUST00000118611 197 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm25224-201ENSMUST00000158195 68 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm23115-201ENSMUST00000158480 108 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm24464-201ENSMUST00000179697 107 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm24518-201ENSMUST00000180275 94 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm27875-201ENSMUST00000184425 123 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm29229-201ENSMUST00000188874 323 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm3010-201ENSMUST00000198805 448 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Snord42a-201ENSMUST00000082606 65 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf38bQ80SY5 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Prpf38bQ80SY5 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm22021-201ENSMUST00000104353 107 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm15364-201ENSMUST00000119618 585 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm15112-201ENSMUST00000120152 860 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm14765-201ENSMUST00000121954 326 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm24857-201ENSMUST00000158061 310 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm22650-201ENSMUST00000175138 105 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm19898-201ENSMUST00000177490 251 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm26866-201ENSMUST00000180414 802 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Mir6933-201ENSMUST00000184982 81 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm43524-201ENSMUST00000197278 298 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm42428-201ENSMUST00000198677 302 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm45614-201ENSMUST00000209994 721 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm25579-201ENSMUST00000083407 106 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm9386-201ENSMUST00000095195 381 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.71□□□□□ -1.5
Prpf38bQ80SY5 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm13085-201ENSMUST00000118356 171 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm12281-201ENSMUST00000119536 298 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm23171-201ENSMUST00000157159 264 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm23279-201ENSMUST00000157912 97 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm22940-201ENSMUST00000158560 155 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm17148-201ENSMUST00000164702 249 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm25671-201ENSMUST00000178612 105 ntBASIC5.7□□□□□ -1.5
Prpf38bQ80SY5 Gm23307-201ENSMUST00000179167 105 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms