Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pif1Q80SX8 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pif1Q80SX8 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Pif1Q80SX8 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.99□□□□□ -1.61
Pif1Q80SX8 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm11486-201ENSMUST00000107322 478 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm15560-201ENSMUST00000117107 643 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm23327-201ENSMUST00000157420 78 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm26170-201ENSMUST00000158419 148 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm24100-201ENSMUST00000178592 79 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm11395-201ENSMUST00000181011 499 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm11394-201ENSMUST00000181421 517 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Mir7056-201ENSMUST00000183776 59 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm8747-201ENSMUST00000195392 751 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm45215-201ENSMUST00000206407 395 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm44820-201ENSMUST00000207420 396 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm24268-201ENSMUST00000082990 110 ntBASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pif1Q80SX8 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm23274-201ENSMUST00000104056 130 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm14537-201ENSMUST00000117464 599 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm11679-201ENSMUST00000121830 779 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm19932-201ENSMUST00000177033 313 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Mir7012-201ENSMUST00000183900 64 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm27588-201ENSMUST00000185096 263 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm28843-201ENSMUST00000189198 678 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm29546-201ENSMUST00000191171 678 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm45327-201ENSMUST00000211612 565 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 AC158981.3-202ENSMUST00000228906 523 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm22456-201ENSMUST00000082578 125 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm25139-201ENSMUST00000083247 210 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm23093-201ENSMUST00000083450 102 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.97□□□□□ -1.61
Pif1Q80SX8 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Pif1Q80SX8 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms