Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm24691-201ENSMUST00000157762 140 ntBASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Mir5123-201ENSMUST00000177794 83 ntBASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm42990-201ENSMUST00000199231 312 ntBASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm45735-201ENSMUST00000212779 319 ntBASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Topbp1Q6ZQF0 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm23911-201ENSMUST00000104596 134 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm14518-201ENSMUST00000117351 542 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm28920-201ENSMUST00000189957 699 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm18445-201ENSMUST00000195502 774 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Topbp1Q6ZQF0 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm11970-201ENSMUST00000116105 320 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm43746-201ENSMUST00000200028 317 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm23162-201ENSMUST00000175081 121 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 AC159188.1-201ENSMUST00000225198 526 ntBASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Topbp1Q6ZQF0 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Topbp1Q6ZQF0 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Topbp1Q6ZQF0 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm13581-201ENSMUST00000120675 278 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm11456-201ENSMUST00000121070 256 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm44319-201ENSMUST00000196974 93 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm44256-201ENSMUST00000203304 335 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 AC069074.2-201ENSMUST00000217819 428 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm22970-201ENSMUST00000083304 186 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.4□□□□□ -1.71
Topbp1Q6ZQF0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Gm24780-201ENSMUST00000157635 143 ntBASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Topbp1Q6ZQF0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Topbp1Q6ZQF0 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Topbp1Q6ZQF0 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.38□□□□□ -1.71
Topbp1Q6ZQF0 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4.38□□□□□ -1.71
Topbp1Q6ZQF0 DQ267100-201ENSMUST00000122600 72 ntBASIC4.38□□□□□ -1.71
Topbp1Q6ZQF0 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms