Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm10552-201ENSMUST00000113396 372 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm14772-201ENSMUST00000116562 514 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm14909-201ENSMUST00000117853 351 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm13273-201ENSMUST00000119737 159 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm25176-201ENSMUST00000122640 125 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm22518-201ENSMUST00000158267 68 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm22836-201ENSMUST00000158441 61 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Mir3964-201ENSMUST00000174898 74 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm25156-201ENSMUST00000179809 79 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm26701-201ENSMUST00000181571 234 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm2325-201ENSMUST00000186637 581 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm18403-201ENSMUST00000192907 529 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm37353-201ENSMUST00000194497 313 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm7407-201ENSMUST00000208301 568 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm7624-201ENSMUST00000209702 435 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm9309-201ENSMUST00000223537 546 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Ear14-201ENSMUST00000049559 468 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm10064-201ENSMUST00000071235 399 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm22740-201ENSMUST00000083439 109 ntBASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm14624-201ENSMUST00000117746 192 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm11367-201ENSMUST00000117802 120 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm13220-201ENSMUST00000121535 508 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm5123-201ENSMUST00000121905 837 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm15212-201ENSMUST00000122403 466 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm5755-201ENSMUST00000152394 837 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm4076-201ENSMUST00000179230 965 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm27818-201ENSMUST00000184536 159 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm5285-201ENSMUST00000193089 666 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm37167-201ENSMUST00000194946 396 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm44349-201ENSMUST00000197048 123 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Igkv12-49-201ENSMUST00000197714 278 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm4321-201ENSMUST00000200520 442 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm18100-201ENSMUST00000200897 452 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm18791-201ENSMUST00000204611 726 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Gm6065-201ENSMUST00000081336 492 ntBASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Rnf220Q6PDX6 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms