Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Six1Q62231 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.65□□□□□ -1.82
Six1Q62231 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm26418-201ENSMUST00000104275 137 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Gm26145-201ENSMUST00000104476 127 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Gm11344-201ENSMUST00000122011 335 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Six1Q62231 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm22034-201ENSMUST00000157283 134 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Gm17061-201ENSMUST00000163167 499 ntBASIC3.65□□□□□ -1.83
Six1Q62231 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Six1Q62231 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Gm43601-201ENSMUST00000196294 945 ntBASIC3.65□□□□□ -1.83
Six1Q62231 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Six1Q62231 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm45796-201ENSMUST00000212483 114 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.65□□□□□ -1.83
Six1Q62231 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.65□□□□□ -1.83
Six1Q62231 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Gm18388-201ENSMUST00000222339 557 ntBASIC3.65□□□□□ -1.83
Six1Q62231 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.65□□□□□ -1.83
Six1Q62231 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.65□□□□□ -1.83
Six1Q62231 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Six1Q62231 Mir325-201ENSMUST00000083491 98 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Six1Q62231 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.65□□□□□ -1.83
Six1Q62231 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Six1Q62231 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.65□□□□□ -1.83
Six1Q62231 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Six1Q62231 Gm24792-201ENSMUST00000104286 128 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm12427-201ENSMUST00000117719 302 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm6893-201ENSMUST00000118385 522 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm15026-201ENSMUST00000119219 458 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm7421-201ENSMUST00000119298 639 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm7365-201ENSMUST00000120877 639 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm23960-201ENSMUST00000157206 131 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm24914-201ENSMUST00000157285 313 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm23179-201ENSMUST00000158693 304 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm9587-201ENSMUST00000172449 454 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm24080-201ENSMUST00000175178 232 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm22367-201ENSMUST00000178930 132 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Six1Q62231 Gm29640-201ENSMUST00000187972 278 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm19774-201ENSMUST00000190667 114 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm37698-201ENSMUST00000192605 463 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm37791-201ENSMUST00000195081 286 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm3933-201ENSMUST00000195391 439 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm42832-201ENSMUST00000196361 745 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Mir129b-201ENSMUST00000197461 65 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.64□□□□□ -1.83
Six1Q62231 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm44817-201ENSMUST00000205416 453 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.64□□□□□ -1.83
Six1Q62231 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.64□□□□□ -1.83
Six1Q62231 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.64□□□□□ -1.83
Six1Q62231 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.64□□□□□ -1.83
Six1Q62231 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm23104-201ENSMUST00000083722 104 ntBASIC3.64□□□□□ -1.83
Six1Q62231 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Six1Q62231 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Six1Q62231 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Six1Q62231 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms