Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm22908-201ENSMUST00000177620 110 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm18406-201ENSMUST00000185872 669 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm38234-201ENSMUST00000195204 421 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm43601-201ENSMUST00000196294 945 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Vsx2Q61412 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Vsx2Q61412 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Snora70-201ENSMUST00000083047 137 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm23530-201ENSMUST00000104564 137 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm23532-201ENSMUST00000104569 112 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm12722-201ENSMUST00000118507 493 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm15799-201ENSMUST00000120899 289 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm12693-201ENSMUST00000121965 483 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm23326-201ENSMUST00000157419 105 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm25835-201ENSMUST00000158917 144 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm23775-201ENSMUST00000158991 249 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm28030-201ENSMUST00000184987 138 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm28155-201ENSMUST00000191066 151 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm44016-201ENSMUST00000203463 164 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm18193-201ENSMUST00000210017 772 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm30674-201ENSMUST00000214523 392 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Vsx2Q61412 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm2710-201ENSMUST00000073196 603 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vsx2Q61412 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vsx2Q61412 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.31□□□□□ -1.88
Vsx2Q61412 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Vsx2Q61412 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Vsx2Q61412 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vsx2Q61412 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Vsx2Q61412 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm14687-201ENSMUST00000120206 363 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm14768-201ENSMUST00000122126 678 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm7846-201ENSMUST00000145844 274 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm25519-201ENSMUST00000158392 127 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm23773-201ENSMUST00000158985 296 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm17153-201ENSMUST00000171314 490 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.3□□□□□ -1.88
Vsx2Q61412 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm45063-201ENSMUST00000203726 472 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm44927-201ENSMUST00000207573 716 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vsx2Q61412 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm18388-201ENSMUST00000222339 557 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Vsx2Q61412 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Vsx2Q61412 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Vsx2Q61412 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Vsx2Q61412 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.3□□□□□ -1.88
Vsx2Q61412 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vsx2Q61412 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm14810-201ENSMUST00000121628 486 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm22380-201ENSMUST00000157479 95 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm16490-201ENSMUST00000165299 351 ntBASIC3.29□□□□□ -1.88
Vsx2Q61412 Gm20542-201ENSMUST00000174582 372 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 222.6 ms