Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.49□□□□□ -1.69
CtcfQ61164 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.49□□□□□ -1.69
CtcfQ61164 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.49□□□□□ -1.69
CtcfQ61164 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm22794-201ENSMUST00000157228 306 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm22555-201ENSMUST00000157801 62 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm23034-201ENSMUST00000158001 147 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm22156-201ENSMUST00000158409 141 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Mir6537-201ENSMUST00000184150 110 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Gm8823-201ENSMUST00000193158 433 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm43556-201ENSMUST00000196186 681 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 AC069561.2-201ENSMUST00000217596 420 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.49□□□□□ -1.69
CtcfQ61164 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CtcfQ61164 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CtcfQ61164 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CtcfQ61164 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CtcfQ61164 Snord21-201ENSMUST00000082519 94 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm23455-201ENSMUST00000083331 100 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CtcfQ61164 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CtcfQ61164 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm26367-201ENSMUST00000104165 132 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm14067-201ENSMUST00000119340 314 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm12691-201ENSMUST00000120186 456 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm6565-201ENSMUST00000121217 438 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm12340-201ENSMUST00000121617 462 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm25278-201ENSMUST00000157267 120 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm25264-201ENSMUST00000158519 117 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm22135-201ENSMUST00000158752 108 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm4222-201ENSMUST00000165784 470 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm5473-201ENSMUST00000179326 642 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm27659-201ENSMUST00000183472 98 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm27387-201ENSMUST00000184583 116 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm38281-201ENSMUST00000192301 315 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm43710-201ENSMUST00000199583 452 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm43228-201ENSMUST00000200735 264 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm45651-201ENSMUST00000210857 335 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm18320-201ENSMUST00000211304 595 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm18160-201ENSMUST00000214279 827 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 CT025603.4-201ENSMUST00000225777 413 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 AC110380.1-201ENSMUST00000226987 389 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Mecom-201ENSMUST00000061088 348 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm24150-201ENSMUST00000082759 104 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm23875-201ENSMUST00000083711 318 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Gm6361-201ENSMUST00000091031 435 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.48□□□□□ -1.69
CtcfQ61164 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CtcfQ61164 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
CtcfQ61164 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CtcfQ61164 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.47□□□□□ -1.69
CtcfQ61164 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm13664-201ENSMUST00000117304 345 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm11408-201ENSMUST00000117889 519 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.47□□□□□ -1.69
CtcfQ61164 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm13687-201ENSMUST00000119857 282 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm12706-201ENSMUST00000121588 698 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm5123-201ENSMUST00000121905 837 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms