Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm24350-201ENSMUST00000104163 133 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm24889-201ENSMUST00000104388 132 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm9043-201ENSMUST00000119677 314 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm13363-201ENSMUST00000122008 522 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm25865-201ENSMUST00000158247 104 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm22242-201ENSMUST00000175224 118 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm25361-201ENSMUST00000179358 76 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm24968-201ENSMUST00000179817 107 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm8941-201ENSMUST00000181451 899 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm42542-201ENSMUST00000197978 268 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm43408-201ENSMUST00000198263 440 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm9560-201ENSMUST00000205012 1201 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 AC132437.1-201ENSMUST00000218308 320 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm18442-201ENSMUST00000220925 639 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 AC098719.1-201ENSMUST00000228920 371 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm37779-201ENSMUST00000194221 3380 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm24789-201ENSMUST00000104282 131 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm12568-201ENSMUST00000117362 624 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm15231-201ENSMUST00000119174 447 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm14046-201ENSMUST00000119389 509 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm22916-201ENSMUST00000157616 119 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm2147-201ENSMUST00000193588 639 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm37743-201ENSMUST00000194645 376 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm43115-201ENSMUST00000196244 160 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm18850-201ENSMUST00000211578 388 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm8158-201ENSMUST00000219220 465 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm8249-201ENSMUST00000219225 465 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm8112-201ENSMUST00000219637 465 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm7540-201ENSMUST00000219764 926 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 CT030187.1-201ENSMUST00000220605 252 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 AC154618.1-201ENSMUST00000227451 303 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm25139-201ENSMUST00000083247 210 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Gm23972-201ENSMUST00000083322 165 ntBASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Scaf1Q5U4C3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Gm42680-201ENSMUST00000196238 2500 ntBASIC7.15□□□□□ -1.27
Scaf1Q5U4C3 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm12803-201ENSMUST00000118907 821 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm15112-201ENSMUST00000120152 860 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm24546-201ENSMUST00000158652 102 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm16569-201ENSMUST00000160526 314 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Mir5103-201ENSMUST00000175111 79 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm20673-201ENSMUST00000177167 430 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm25671-201ENSMUST00000178612 105 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm23307-201ENSMUST00000179167 105 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm24464-201ENSMUST00000179697 107 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm25286-201ENSMUST00000179790 105 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Mir6400-201ENSMUST00000184870 92 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm37732-201ENSMUST00000194377 316 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm44409-201ENSMUST00000198810 166 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm44092-201ENSMUST00000204470 258 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm45731-201ENSMUST00000211988 1203 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms