Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm13532-201ENSMUST00000120373 240 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm23791-201ENSMUST00000122553 293 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm28871-201ENSMUST00000186191 687 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm3933-201ENSMUST00000195391 439 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12387-201ENSMUST00000118573 955 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm26477-201ENSMUST00000122617 323 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm5552-201ENSMUST00000197149 515 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm19726-201ENSMUST00000205008 240 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm4057-201ENSMUST00000221407 368 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm28785-201ENSMUST00000187478 379 ntBASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm24465-201ENSMUST00000178398 107 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12222-201ENSMUST00000121368 260 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm16218-201ENSMUST00000155424 388 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm26187-201ENSMUST00000157693 101 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm24190-201ENSMUST00000157976 216 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm6245-201ENSMUST00000164699 768 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm2427-201ENSMUST00000189121 881 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.75□□□□□ -1.81
Ccdc88aQ5SNZ0 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm14930-201ENSMUST00000118864 652 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm12788-201ENSMUST00000119090 308 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm23824-201ENSMUST00000158741 276 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm16318-201ENSMUST00000162402 601 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm7870-201ENSMUST00000184467 616 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.74□□□□□ -1.81
Ccdc88aQ5SNZ0 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms