Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm43990-201ENSMUST00000203790 1691 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm25096-201ENSMUST00000104043 129 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm13808-201ENSMUST00000121353 184 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm14736-201ENSMUST00000121470 336 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm5392-201ENSMUST00000122189 789 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm23213-201ENSMUST00000122715 313 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Magea9-ps-201ENSMUST00000140655 732 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm26036-201ENSMUST00000158149 144 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm28314-201ENSMUST00000191276 345 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm44403-201ENSMUST00000198554 129 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm43203-201ENSMUST00000200130 558 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm44555-201ENSMUST00000209008 148 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 AL772397.1-201ENSMUST00000216707 606 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm7540-201ENSMUST00000219764 926 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 AC166574.3-201ENSMUST00000226725 367 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav3-1Q5R1I8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm25593-201ENSMUST00000102272 96 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm24831-201ENSMUST00000116778 126 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm14771-201ENSMUST00000118249 203 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm12722-201ENSMUST00000118507 493 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm25179-201ENSMUST00000122632 128 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm25177-201ENSMUST00000122634 117 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm24719-201ENSMUST00000157520 110 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm17044-201ENSMUST00000168549 828 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm8214-201ENSMUST00000172123 351 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm22398-201ENSMUST00000174941 125 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm25731-201ENSMUST00000175167 125 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm27477-201ENSMUST00000184649 143 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm27653-201ENSMUST00000185037 136 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm18547-201ENSMUST00000192439 811 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm36939-201ENSMUST00000194889 439 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm36986-201ENSMUST00000195320 353 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Igkv2-107-201ENSMUST00000196000 313 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Trav3-2-201ENSMUST00000198999 305 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm6030-201ENSMUST00000078768 402 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 n-R5s7-201ENSMUST00000083755 121 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trav3-1Q5R1I8 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm12852-201ENSMUST00000119478 719 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm12885-201ENSMUST00000122246 328 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC2.11□□□□□ -2.07
Trav3-1Q5R1I8 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 124.9 ms