Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm17917-201ENSMUST00000218561 953 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Snora70-201ENSMUST00000083047 137 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm23455-201ENSMUST00000083331 100 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm22864-201ENSMUST00000083950 130 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm37674-201ENSMUST00000194177 1834 ntBASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav6-3Q5R1E6 Gm42728-201ENSMUST00000202644 1552 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm15933-201ENSMUST00000117215 616 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm13167-201ENSMUST00000118554 578 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm15126-201ENSMUST00000118631 833 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm11843-201ENSMUST00000118984 425 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm9308-201ENSMUST00000119073 448 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm15014-201ENSMUST00000120742 258 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm6969-201ENSMUST00000140065 342 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm22034-201ENSMUST00000157283 134 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm24960-201ENSMUST00000157923 90 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm14527-201ENSMUST00000179300 639 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Mir7074-201ENSMUST00000183884 63 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm8498-201ENSMUST00000188227 974 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm37239-201ENSMUST00000193510 141 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm38234-201ENSMUST00000195204 421 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm43531-201ENSMUST00000200676 1114 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm42474-201ENSMUST00000201073 505 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm4501-201ENSMUST00000207330 551 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm7587-201ENSMUST00000207618 1021 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm4558-201ENSMUST00000207886 521 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm4528-201ENSMUST00000207905 551 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm30738-201ENSMUST00000221346 502 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm25480-201ENSMUST00000083217 133 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Gm44078-201ENSMUST00000204652 2646 ntBASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav6-3Q5R1E6 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Trav6-3Q5R1E6 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.97
Trav6-3Q5R1E6 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm12125-201ENSMUST00000117261 736 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm12722-201ENSMUST00000118507 493 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm22310-201ENSMUST00000157509 116 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm5929-201ENSMUST00000166883 487 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm17063-201ENSMUST00000168135 456 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Mir6393-201ENSMUST00000183709 94 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm28141-201ENSMUST00000186676 342 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.77□□□□□ -1.97
Trav6-3Q5R1E6 Gm18429-201ENSMUST00000198707 421 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms