Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm24936-201ENSMUST00000122598 247 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm26487-201ENSMUST00000158022 94 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm27773-201ENSMUST00000184087 78 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm29064-201ENSMUST00000187014 813 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm28594-201ENSMUST00000187022 661 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm3496-201ENSMUST00000188283 745 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm42621-201ENSMUST00000198114 275 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm2189-201ENSMUST00000201419 429 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm7786-201ENSMUST00000210494 436 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm3565-201ENSMUST00000222670 609 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm10237-201ENSMUST00000078393 273 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm23736-201ENSMUST00000082553 75 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Mir101b-201ENSMUST00000083622 97 ntBASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim58Q5NCC9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm13873-201ENSMUST00000119208 427 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm11387-201ENSMUST00000120266 772 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm15120-201ENSMUST00000120602 301 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm22320-201ENSMUST00000157149 312 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Mir1934-201ENSMUST00000158127 83 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm2389-201ENSMUST00000160487 189 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Mir6413-201ENSMUST00000184049 108 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm28654-201ENSMUST00000189801 379 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm20162-201ENSMUST00000193629 871 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm18433-202ENSMUST00000195682 196 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm43441-201ENSMUST00000201458 205 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm18645-202ENSMUST00000212222 760 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm18585-201ENSMUST00000215197 556 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm7034-201ENSMUST00000218638 645 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Diaph3-206ENSMUST00000226745 713 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim58Q5NCC9 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Trim58Q5NCC9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm11673-201ENSMUST00000117846 331 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm14681-201ENSMUST00000118047 411 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm13064-201ENSMUST00000119125 557 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm14599-201ENSMUST00000120469 474 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm14037-201ENSMUST00000120576 313 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm11385-201ENSMUST00000121513 570 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm25109-201ENSMUST00000122474 114 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm24289-201ENSMUST00000157629 135 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm18415-201ENSMUST00000177464 647 ntBASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim58Q5NCC9 Gm44665-201ENSMUST00000205381 251 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms