Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm5917-201ENSMUST00000217638 721 ntBASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Gm46234-201ENSMUST00000218702 259 ntBASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Gm14387-201ENSMUST00000121827 2055 ntBASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm16274-201ENSMUST00000139251 592 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm24787-201ENSMUST00000157380 123 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm25004-201ENSMUST00000083811 161 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm15697-201ENSMUST00000121946 2902 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm14576-201ENSMUST00000118073 1111 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm11229-201ENSMUST00000121993 437 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm29161-201ENSMUST00000188250 699 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Gm4057-201ENSMUST00000221407 368 ntBASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Gm13329-201ENSMUST00000117063 265 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Gm6842-201ENSMUST00000211361 390 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Gm10242-201ENSMUST00000090064 330 ntBASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc88bQ4QRL3 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Gm23963-201ENSMUST00000179603 77 ntBASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 AC140393.2-201ENSMUST00000226894 943 ntBASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Gm23136-201ENSMUST00000083425 99 ntBASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88bQ4QRL3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Gm23011-201ENSMUST00000104148 132 ntBASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Gm22214-201ENSMUST00000157563 172 ntBASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Gm17117-201ENSMUST00000163665 299 ntBASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 CT030247.1-201ENSMUST00000216810 267 ntBASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ccdc88bQ4QRL3 Gm43658-201ENSMUST00000202348 4176 ntBASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Gm11456-201ENSMUST00000121070 256 ntBASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Gm44343-201ENSMUST00000196702 90 ntBASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Gm4052-201ENSMUST00000220890 451 ntBASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc88bQ4QRL3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ccdc88bQ4QRL3 Gm44150-201ENSMUST00000203317 2619 ntBASIC5.15□□□□□ -1.59
Ccdc88bQ4QRL3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ccdc88bQ4QRL3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ccdc88bQ4QRL3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Mir8116-201ENSMUST00000184134 97 ntBASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Gm28877-201ENSMUST00000191349 604 ntBASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 BC055308-201ENSMUST00000193380 2538 ntBASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.14□□□□□ -1.59
Ccdc88bQ4QRL3 Gm26342-201ENSMUST00000104557 129 ntBASIC5.13□□□□□ -1.59
Ccdc88bQ4QRL3 Gm25866-201ENSMUST00000158245 112 ntBASIC5.13□□□□□ -1.59
Ccdc88bQ4QRL3 Gm27505-201ENSMUST00000185071 110 ntBASIC5.13□□□□□ -1.59
Ccdc88bQ4QRL3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc88bQ4QRL3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms