Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm42850-201ENSMUST00000202094 201 ntBASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm18387-201ENSMUST00000220333 702 ntBASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm6195-201ENSMUST00000063059 357 ntBASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Shank3Q4ACU6 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm26423-201ENSMUST00000104277 128 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm24720-201ENSMUST00000157518 166 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm29148-201ENSMUST00000188140 336 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm42758-201ENSMUST00000202146 283 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm6064-201ENSMUST00000203999 454 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm14649-201ENSMUST00000121814 324 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm26477-201ENSMUST00000122617 323 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm3123-201ENSMUST00000163480 480 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Gm35405-201ENSMUST00000218754 400 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shank3Q4ACU6 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Mir344c-201ENSMUST00000103919 92 ntBASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Mir290a-201ENSMUST00000104627 83 ntBASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Gm15103-201ENSMUST00000119893 871 ntBASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Gm38041-201ENSMUST00000194445 661 ntBASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Amd-ps5-201ENSMUST00000198406 989 ntBASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Shank3Q4ACU6 Gm336-201ENSMUST00000186376 1480 ntBASIC4.03□□□□□ -1.77
Shank3Q4ACU6 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Gm24675-201ENSMUST00000158757 259 ntBASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Gm38075-201ENSMUST00000191979 920 ntBASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Gm18692-201ENSMUST00000193047 511 ntBASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 AC159188.1-201ENSMUST00000225198 526 ntBASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Shank3Q4ACU6 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm25270-201ENSMUST00000122606 138 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 AC168266.1-201ENSMUST00000216024 226 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm12858-201ENSMUST00000121913 208 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm22849-201ENSMUST00000157713 307 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm8392-201ENSMUST00000185647 835 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm44319-201ENSMUST00000196974 93 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Gm25004-201ENSMUST00000083811 161 ntBASIC4.01□□□□□ -1.77
Shank3Q4ACU6 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Shank3Q4ACU6 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Shank3Q4ACU6 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Shank3Q4ACU6 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Shank3Q4ACU6 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms