Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm9890-201ENSMUST00000171867 537 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm27315-201ENSMUST00000183977 154 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm29576-201ENSMUST00000188020 678 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm28354-201ENSMUST00000190904 678 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm42621-201ENSMUST00000198114 275 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm18597-201ENSMUST00000209519 694 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 AF357428-201ENSMUST00000083815 69 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm24118-201ENSMUST00000103972 126 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm5754-201ENSMUST00000118774 892 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm12448-201ENSMUST00000118852 655 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm12358-201ENSMUST00000121842 520 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm24739-201ENSMUST00000158855 292 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm21006-201ENSMUST00000196930 667 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm45078-201ENSMUST00000205343 546 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm45701-201ENSMUST00000212049 235 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm4987-201ENSMUST00000078326 408 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm22005-201ENSMUST00000082795 141 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Upf3aQ3ULJ3 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm14926-201ENSMUST00000120650 508 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm14775-201ENSMUST00000122089 310 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm13868-201ENSMUST00000122411 294 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Samd15-201ENSMUST00000169669 1194 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm20526-201ENSMUST00000173416 158 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm18406-201ENSMUST00000185872 669 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm43494-201ENSMUST00000197672 388 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Upf3aQ3ULJ3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm14681-201ENSMUST00000118047 411 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm4725-201ENSMUST00000151048 587 ntBASIC3.71□□□□□ -1.82
Upf3aQ3ULJ3 Gm23231-201ENSMUST00000157299 104 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms