Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm18644-201ENSMUST00000211458 815 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm7639-201ENSMUST00000212608 484 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm5518-201ENSMUST00000084171 648 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm11869-201ENSMUST00000118701 329 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm6071-201ENSMUST00000119561 440 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm13687-201ENSMUST00000119857 282 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm16053-201ENSMUST00000120511 188 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm14845-201ENSMUST00000121259 306 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm14713-201ENSMUST00000122362 686 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm23084-201ENSMUST00000157850 114 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm26005-201ENSMUST00000158802 134 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm18604-201ENSMUST00000172535 558 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm26746-201ENSMUST00000181722 487 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Mir6385-201ENSMUST00000184295 105 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm36954-201ENSMUST00000195362 363 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Mir1892-201ENSMUST00000197752 80 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm43992-201ENSMUST00000204358 197 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm18598-201ENSMUST00000207724 597 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm18120-201ENSMUST00000220079 511 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm3829-201ENSMUST00000222362 619 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Mir350-201ENSMUST00000083639 99 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trafd1Q3UDK1 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Mir804-201ENSMUST00000103251 95 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm8569-201ENSMUST00000117630 647 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm13459-201ENSMUST00000121558 646 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm11344-201ENSMUST00000122011 335 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm12226-201ENSMUST00000144172 876 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm26001-201ENSMUST00000157989 103 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm24754-201ENSMUST00000177997 107 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm36934-201ENSMUST00000192007 306 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm37698-201ENSMUST00000192605 463 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 Gm18704-201ENSMUST00000219736 446 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.6□□□□□ -1.83
Trafd1Q3UDK1 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms