Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 CT025603.4-201ENSMUST00000225777 413 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm37598-201ENSMUST00000194506 1301 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm14385-201ENSMUST00000116315 876 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm11398-201ENSMUST00000120330 320 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm13677-201ENSMUST00000120739 595 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm11404-201ENSMUST00000120872 494 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm25977-201ENSMUST00000158697 85 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm4134-201ENSMUST00000173244 563 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm9309-201ENSMUST00000223537 546 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 AC162857.1-201ENSMUST00000226614 400 ntBASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ddb1Q3U1J4 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.4□□□□□ -1.55
Ddb1Q3U1J4 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ddb1Q3U1J4 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.4□□□□□ -1.55
Ddb1Q3U1J4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ddb1Q3U1J4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.4□□□□□ -1.55
Ddb1Q3U1J4 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ddb1Q3U1J4 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm23175-201ENSMUST00000104371 132 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm11845-201ENSMUST00000117886 327 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm11357-201ENSMUST00000119758 954 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm16445-201ENSMUST00000120399 714 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm5646-201ENSMUST00000120568 714 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm14605-201ENSMUST00000120599 268 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Snrpert-201ENSMUST00000121967 279 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm11692-201ENSMUST00000122121 902 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm25966-201ENSMUST00000157169 117 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm22084-201ENSMUST00000157585 105 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm24690-201ENSMUST00000157759 97 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm24965-201ENSMUST00000157922 106 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm15143-201ENSMUST00000178180 714 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm38261-201ENSMUST00000192608 316 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm17954-201ENSMUST00000195893 607 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm42990-201ENSMUST00000199231 312 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm42458-201ENSMUST00000201914 369 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm18116-201ENSMUST00000220920 537 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm3565-201ENSMUST00000222670 609 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 AC154747.1-201ENSMUST00000225265 239 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms