Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25718-201ENSMUST00000158632 118 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm27385-201ENSMUST00000184747 104 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm18698-201ENSMUST00000192327 668 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm42459-201ENSMUST00000199679 742 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm4321-201ENSMUST00000200520 442 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm43914-201ENSMUST00000203592 594 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm29754-201ENSMUST00000206269 358 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm44757-201ENSMUST00000206373 157 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm45023-201ENSMUST00000207951 379 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm7786-201ENSMUST00000210494 436 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm45735-201ENSMUST00000212779 319 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm8158-201ENSMUST00000219220 465 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm8112-201ENSMUST00000219637 465 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm20102-201ENSMUST00000222445 220 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm22456-201ENSMUST00000082578 125 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm24622-201ENSMUST00000082619 162 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm22229-201ENSMUST00000082987 108 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm23686-201ENSMUST00000083241 164 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm23691-201ENSMUST00000101878 107 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm22493-201ENSMUST00000104494 132 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm14163-201ENSMUST00000117342 217 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm11936-201ENSMUST00000118323 160 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm12235-201ENSMUST00000118596 170 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm14732-201ENSMUST00000121372 545 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm23279-201ENSMUST00000157912 97 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm22519-201ENSMUST00000158270 178 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm26170-201ENSMUST00000158419 148 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm22940-201ENSMUST00000158560 155 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm5558-201ENSMUST00000178933 495 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm23793-201ENSMUST00000179396 117 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm23144-201ENSMUST00000180226 107 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm27690-201ENSMUST00000184596 126 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm29228-201ENSMUST00000185489 418 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm6501-201ENSMUST00000187178 916 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm37445-201ENSMUST00000195318 242 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm45422-201ENSMUST00000211476 246 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.44□□□□□ -1.7
Col8a1Q00780 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms