Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.4□□□□□ -1.87
Sox6P40645 Gm26746-201ENSMUST00000181722 487 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.4□□□□□ -1.87
Sox6P40645 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sox6P40645 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Gm33973-201ENSMUST00000195148 534 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Gm42438-201ENSMUST00000197832 974 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Gm5322-201ENSMUST00000206142 699 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.4□□□□□ -1.87
Sox6P40645 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sox6P40645 Gm2059-201ENSMUST00000212025 287 ntBASIC3.4□□□□□ -1.87
Sox6P40645 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.4□□□□□ -1.87
Sox6P40645 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.4□□□□□ -1.87
Sox6P40645 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sox6P40645 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sox6P40645 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sox6P40645 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Sox6P40645 Gm10242-201ENSMUST00000090064 330 ntBASIC3.4□□□□□ -1.87
Sox6P40645 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
Sox6P40645 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sox6P40645 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm9432-201ENSMUST00000117810 759 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm11896-201ENSMUST00000121105 820 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm26476-201ENSMUST00000122618 313 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm25427-201ENSMUST00000157605 103 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm26000-201ENSMUST00000157991 107 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm6374-201ENSMUST00000159051 788 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Mir1264-201ENSMUST00000175381 86 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.39□□□□□ -1.87
Sox6P40645 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Sox6P40645 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Sox6P40645 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm29408-201ENSMUST00000187536 216 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm37684-201ENSMUST00000192779 355 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.39□□□□□ -1.87
Sox6P40645 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm43704-201ENSMUST00000196164 496 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm5552-201ENSMUST00000197149 515 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm3829-201ENSMUST00000222362 619 ntBASIC3.39□□□□□ -1.87
Sox6P40645 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.39□□□□□ -1.87
Sox6P40645 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm9818-201ENSMUST00000050900 255 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sox6P40645 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sox6P40645 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox6P40645 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.39□□□□□ -1.87
Sox6P40645 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sox6P40645 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Sox6P40645 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.38□□□□□ -1.87
Sox6P40645 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Sox6P40645 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Sox6P40645 Gm13650-201ENSMUST00000117729 433 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm15613-201ENSMUST00000118396 326 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm12873-201ENSMUST00000119988 422 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm14687-201ENSMUST00000120206 363 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm14840-201ENSMUST00000122135 594 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm22480-201ENSMUST00000122568 128 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sox6P40645 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.38□□□□□ -1.87
Sox6P40645 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sox6P40645 Gm20542-201ENSMUST00000174582 372 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm22120-201ENSMUST00000175590 70 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm5527-201ENSMUST00000179821 642 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.38□□□□□ -1.87
Sox6P40645 Gm28654-201ENSMUST00000189801 379 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm37343-201ENSMUST00000192542 111 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sox6P40645 Gm7639-201ENSMUST00000212608 484 ntBASIC3.38□□□□□ -1.87
Sox6P40645 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.38□□□□□ -1.87
Sox6P40645 Gm18507-201ENSMUST00000218855 525 ntBASIC3.38□□□□□ -1.87
Sox6P40645 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Sox6P40645 Gm8249-201ENSMUST00000219225 465 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm7540-201ENSMUST00000219764 926 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Gm8274-201ENSMUST00000219820 463 ntBASIC3.38□□□□□ -1.87
Sox6P40645 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.38□□□□□ -1.87
Sox6P40645 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.38□□□□□ -1.87
Sox6P40645 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sox6P40645 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sox6P40645 Gm24626-201ENSMUST00000082621 161 ntBASIC3.38□□□□□ -1.87
Sox6P40645 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sox6P40645 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sox6P40645 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sox6P40645 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms