Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.52□□□□□ -1.69
Traf1P39428 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Mir690-201ENSMUST00000102110 109 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm23431-201ENSMUST00000104006 107 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm11403-201ENSMUST00000122195 369 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm22478-201ENSMUST00000122570 154 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm24998-201ENSMUST00000157908 89 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm16290-201ENSMUST00000161175 474 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm26460-201ENSMUST00000175061 126 ntBASIC4.52□□□□□ -1.69
Traf1P39428 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Gm28594-201ENSMUST00000187022 661 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm3489-201ENSMUST00000190083 528 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm37495-201ENSMUST00000194590 264 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm43405-201ENSMUST00000198642 337 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm43897-201ENSMUST00000204019 309 ntBASIC4.52□□□□□ -1.69
Traf1P39428 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.52□□□□□ -1.69
Traf1P39428 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.52□□□□□ -1.69
Traf1P39428 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.52□□□□□ -1.69
Traf1P39428 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Traf1P39428 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Gm26203-201ENSMUST00000082911 114 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Gm23443-201ENSMUST00000082916 128 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Traf1P39428 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Gm10704-201ENSMUST00000098952 730 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Traf1P39428 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.52□□□□□ -1.69
Traf1P39428 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Traf1P39428 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Traf1P39428 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm26418-201ENSMUST00000104275 137 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Traf1P39428 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm15268-201ENSMUST00000118845 352 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm12294-201ENSMUST00000119723 490 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm11387-201ENSMUST00000120266 772 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm12358-201ENSMUST00000121842 520 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm23198-201ENSMUST00000158811 91 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm6625-201ENSMUST00000177870 272 ntBASIC4.51□□□□□ -1.69
Traf1P39428 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Traf1P39428 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Traf1P39428 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Traf1P39428 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm27033-201ENSMUST00000183226 544 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm7443-201ENSMUST00000206355 378 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm18944-201ENSMUST00000207672 643 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.51□□□□□ -1.69
Traf1P39428 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.51□□□□□ -1.69
Traf1P39428 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.51□□□□□ -1.69
Traf1P39428 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.51□□□□□ -1.69
Traf1P39428 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.51□□□□□ -1.69
Traf1P39428 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.51□□□□□ -1.69
Traf1P39428 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Traf1P39428 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Traf1P39428 Gm25481-201ENSMUST00000083221 158 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Traf1P39428 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Traf1P39428 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Traf1P39428 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.51□□□□□ -1.69
Traf1P39428 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Traf1P39428 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.5□□□□□ -1.69
Traf1P39428 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms