Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.67□□□□□ -1.5
Msx1P13297 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Gm6474-201ENSMUST00000223250 699 ntBASIC5.67□□□□□ -1.5
Msx1P13297 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.67□□□□□ -1.5
Msx1P13297 AC125223.1-203ENSMUST00000225304 498 ntBASIC5.67□□□□□ -1.5
Msx1P13297 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Mir375-201ENSMUST00000083682 64 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Msx1P13297 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.66□□□□□ -1.5
Msx1P13297 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Msx1P13297 Gm24482-201ENSMUST00000117005 93 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm11600-201ENSMUST00000119592 240 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm24629-201ENSMUST00000122762 89 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm25152-201ENSMUST00000157117 114 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm25051-201ENSMUST00000158602 249 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm3191-201ENSMUST00000167139 346 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm24085-201ENSMUST00000175172 116 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm24168-201ENSMUST00000178825 107 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.66□□□□□ -1.5
Msx1P13297 Gm27148-201ENSMUST00000185086 160 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm36934-201ENSMUST00000192007 306 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm42623-201ENSMUST00000197225 379 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Mir3535-201ENSMUST00000197651 147 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm25755-201ENSMUST00000083396 107 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Mir134-201ENSMUST00000083492 71 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Msx1P13297 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Msx1P13297 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Msx1P13297 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.66□□□□□ -1.5
Msx1P13297 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Msx1P13297 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Msx1P13297 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.65□□□□□ -1.5
Msx1P13297 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Msx1P13297 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Msx1P13297 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Msx1P13297 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm13811-201ENSMUST00000117800 256 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm25966-201ENSMUST00000157169 117 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm24216-201ENSMUST00000158259 117 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm24106-201ENSMUST00000175498 127 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Gm37692-201ENSMUST00000192633 232 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm8242-202ENSMUST00000193056 475 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.65□□□□□ -1.5
Msx1P13297 Gm44720-201ENSMUST00000206076 260 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm7407-201ENSMUST00000208301 568 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm6009-201ENSMUST00000210848 280 ntBASIC5.65□□□□□ -1.5
Msx1P13297 AC126267.1-201ENSMUST00000214282 284 ntBASIC5.65□□□□□ -1.5
Msx1P13297 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.65□□□□□ -1.5
Msx1P13297 Gm9237-201ENSMUST00000221499 548 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm5899-201ENSMUST00000071770 270 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm26446-201ENSMUST00000082455 103 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Gm22628-201ENSMUST00000082988 107 ntBASIC5.65□□□□□ -1.5
Msx1P13297 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Msx1P13297 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms