Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm29299-201ENSMUST00000185609 923 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm29573-201ENSMUST00000190291 919 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm37428-201ENSMUST00000193886 137 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm17956-201ENSMUST00000199931 838 ntBASIC4.02□□□□□ -1.77
Lire1P11260 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.02□□□□□ -1.77
Lire1P11260 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lire1P11260 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lire1P11260 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lire1P11260 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lire1P11260 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Lire1P11260 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Lire1P11260 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Lire1P11260 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Lire1P11260 Gm7123-201ENSMUST00000117647 213 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm15058-201ENSMUST00000117689 458 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm13607-201ENSMUST00000117875 539 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm5391-201ENSMUST00000121155 613 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm14500-201ENSMUST00000121647 113 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm14253-201ENSMUST00000122112 639 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm13676-201ENSMUST00000122185 591 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm23887-201ENSMUST00000122683 172 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Lire1P11260 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.01□□□□□ -1.77
Lire1P11260 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.01□□□□□ -1.77
Lire1P11260 Gm24745-201ENSMUST00000157840 85 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Mir5136-201ENSMUST00000175573 76 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Lire1P11260 Mir6715-201ENSMUST00000184990 57 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.01□□□□□ -1.77
Lire1P11260 Gm7634-201ENSMUST00000185778 553 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Gm28830-201ENSMUST00000188192 213 ntBASIC4.01□□□□□ -1.77
Lire1P11260 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms