Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm11878-201ENSMUST00000117908 400 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm8129-201ENSMUST00000118230 213 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm12837-201ENSMUST00000120131 373 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm26098-201ENSMUST00000157247 288 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Zakit-201ENSMUST00000157677 308 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm23069-201ENSMUST00000158240 311 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm23583-201ENSMUST00000158533 289 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm22434-201ENSMUST00000158549 122 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm26468-201ENSMUST00000158644 106 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm23024-201ENSMUST00000158770 292 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm21999-201ENSMUST00000165985 387 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm20428-201ENSMUST00000174365 283 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm29105-201ENSMUST00000187256 450 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm28389-201ENSMUST00000190090 697 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm29038-201ENSMUST00000191543 678 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm22897-201ENSMUST00000197860 128 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm44261-201ENSMUST00000203337 209 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm3442-201ENSMUST00000216808 710 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm24446-201ENSMUST00000083982 156 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.26□□□□□ -1.73
Lmx1bO88609 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.26□□□□□ -1.73
Lmx1bO88609 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lmx1bO88609 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lmx1bO88609 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lmx1bO88609 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lmx1bO88609 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Lmx1bO88609 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Mir208b-201ENSMUST00000104735 77 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm15752-201ENSMUST00000117427 394 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm14878-201ENSMUST00000118167 293 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm14750-201ENSMUST00000118262 516 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm11798-201ENSMUST00000119150 421 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm11584-201ENSMUST00000120636 325 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm22958-201ENSMUST00000122512 184 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm15899-201ENSMUST00000128586 238 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm23465-201ENSMUST00000157134 262 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm24507-201ENSMUST00000157683 134 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm25605-201ENSMUST00000158364 124 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm4076-201ENSMUST00000179230 965 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm6501-201ENSMUST00000187178 916 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm29668-201ENSMUST00000187802 315 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Trbv8-201ENSMUST00000194020 285 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm42990-201ENSMUST00000199231 312 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm8041-201ENSMUST00000199755 616 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm45171-201ENSMUST00000206360 736 ntBASIC4.25□□□□□ -1.73
Lmx1bO88609 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.25□□□□□ -1.73
Lmx1bO88609 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms