Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.25□□□□□ -1.89
Cx3cl1O35188 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.25□□□□□ -1.89
Cx3cl1O35188 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cx3cl1O35188 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm14811-201ENSMUST00000117070 117 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm14621-201ENSMUST00000117709 689 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm6079-201ENSMUST00000121356 404 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm14383-201ENSMUST00000121637 386 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm22036-201ENSMUST00000157279 215 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm18604-201ENSMUST00000172535 558 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Mir5098-201ENSMUST00000175320 82 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm37097-201ENSMUST00000193676 336 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm36943-201ENSMUST00000194422 282 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm5309-201ENSMUST00000197416 677 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm19599-201ENSMUST00000218898 358 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 AF357341-201ENSMUST00000083088 75 ntBASIC3.24□□□□□ -1.89
Cx3cl1O35188 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cx3cl1O35188 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cx3cl1O35188 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cx3cl1O35188 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm25272-201ENSMUST00000104293 128 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm13076-201ENSMUST00000118041 204 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm13122-201ENSMUST00000118380 453 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm12458-201ENSMUST00000119387 495 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm11385-201ENSMUST00000121513 570 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm12998-201ENSMUST00000122445 789 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm23592-201ENSMUST00000157859 117 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm27315-201ENSMUST00000183977 154 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm28030-201ENSMUST00000184987 138 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm43090-201ENSMUST00000202459 314 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm45080-201ENSMUST00000206648 283 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm23925-201ENSMUST00000082471 132 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Snora7a-201ENSMUST00000082629 140 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm24147-201ENSMUST00000082763 144 ntBASIC3.23□□□□□ -1.89
Cx3cl1O35188 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cx3cl1O35188 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm24008-201ENSMUST00000157733 138 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm24965-201ENSMUST00000157922 106 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm20574-201ENSMUST00000182867 917 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm37290-201ENSMUST00000195775 339 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm36382-201ENSMUST00000198892 541 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm43039-201ENSMUST00000202883 963 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm21007-201ENSMUST00000221024 326 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Mir101b-201ENSMUST00000083622 97 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cx3cl1O35188 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.22□□□□□ -1.89
Cx3cl1O35188 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Cx3cl1O35188 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms