Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
NpcdF8VQB8 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NpcdF8VQB8 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.05□□□□□ -1.44
NpcdF8VQB8 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm36931-201ENSMUST00000192997 4801 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm25419-201ENSMUST00000104215 191 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm23594-201ENSMUST00000104307 134 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm13567-201ENSMUST00000118026 247 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm14878-201ENSMUST00000118167 293 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm14831-201ENSMUST00000120253 409 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm28016-201ENSMUST00000184594 196 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm43652-201ENSMUST00000196219 675 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm44650-201ENSMUST00000206929 194 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm45232-201ENSMUST00000207811 162 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 AC154305.1-201ENSMUST00000224443 450 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Olfr197-201ENSMUST00000080031 926 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Snord22-201ENSMUST00000083153 126 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Mir20a-201ENSMUST00000083508 107 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Gm42494-201ENSMUST00000196515 3051 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 AC147639.2-202ENSMUST00000224834 1545 ntBASIC6.04□□□□□ -1.44
NpcdF8VQB8 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NpcdF8VQB8 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm14142-201ENSMUST00000117833 296 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm13932-201ENSMUST00000120873 610 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm24965-201ENSMUST00000157922 106 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm23964-201ENSMUST00000157966 107 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm8338-201ENSMUST00000163928 363 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm26556-201ENSMUST00000180645 320 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Trbv12-3-201ENSMUST00000192675 372 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm43624-201ENSMUST00000197368 180 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm19131-201ENSMUST00000203408 789 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm45344-201ENSMUST00000211610 341 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 AC156790.5-201ENSMUST00000227075 231 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.03□□□□□ -1.44
NpcdF8VQB8 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
NpcdF8VQB8 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
NpcdF8VQB8 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NpcdF8VQB8 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
NpcdF8VQB8 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NpcdF8VQB8 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NpcdF8VQB8 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NpcdF8VQB8 Gm6923-201ENSMUST00000118343 406 ntBASIC6.02□□□□□ -1.45
NpcdF8VQB8 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NpcdF8VQB8 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.02□□□□□ -1.45
NpcdF8VQB8 Gm14129-201ENSMUST00000122436 291 ntBASIC6.02□□□□□ -1.45
NpcdF8VQB8 Gm25781-201ENSMUST00000122527 84 ntBASIC6.02□□□□□ -1.45
NpcdF8VQB8 Gm24192-201ENSMUST00000157978 145 ntBASIC6.02□□□□□ -1.45
NpcdF8VQB8 Gm23115-201ENSMUST00000158480 108 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms