Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm13664-201ENSMUST00000117304 345 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm14142-201ENSMUST00000117833 296 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm2003-201ENSMUST00000118537 636 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm14541-201ENSMUST00000118985 157 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm11625-201ENSMUST00000119535 296 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm1989-201ENSMUST00000126244 636 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm16303-201ENSMUST00000161498 390 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm24754-201ENSMUST00000177997 107 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm14527-201ENSMUST00000179300 639 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm5731-201ENSMUST00000190969 481 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm38332-201ENSMUST00000194189 147 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm45553-201ENSMUST00000209929 507 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm6929-201ENSMUST00000210930 468 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm5917-201ENSMUST00000217638 721 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.9□□□□□ -1.79
Srp54bE9PXC0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Srp54bE9PXC0 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm23322-201ENSMUST00000104464 167 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm4732-201ENSMUST00000118778 473 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm14607-201ENSMUST00000119119 491 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm13868-201ENSMUST00000122411 294 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm25436-201ENSMUST00000158275 145 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm2862-201ENSMUST00000161524 328 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm25412-201ENSMUST00000180258 107 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm21960-201ENSMUST00000181924 452 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm27522-201ENSMUST00000183949 230 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28574-201ENSMUST00000185757 699 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28781-201ENSMUST00000185760 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28339-201ENSMUST00000185845 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29062-201ENSMUST00000186032 694 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29574-201ENSMUST00000186226 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28828-201ENSMUST00000186601 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28057-201ENSMUST00000186603 615 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28255-201ENSMUST00000187101 694 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29307-201ENSMUST00000187367 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28397-201ENSMUST00000187970 699 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28896-201ENSMUST00000188609 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29545-201ENSMUST00000188878 694 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29339-201ENSMUST00000189613 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm28159-201ENSMUST00000190296 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29366-201ENSMUST00000190481 699 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm29407-201ENSMUST00000191468 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm37433-201ENSMUST00000192695 678 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm37441-201ENSMUST00000194430 678 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm38107-201ENSMUST00000194873 696 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm18429-201ENSMUST00000198707 421 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm43979-201ENSMUST00000203179 475 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm44092-201ENSMUST00000204470 258 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm45735-201ENSMUST00000212779 319 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm23518-201ENSMUST00000082835 153 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm23443-201ENSMUST00000082916 128 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Srp54bE9PXC0 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.88□□□□□ -1.79
Srp54bE9PXC0 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms