Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Gm44754-201ENSMUST00000208155 400 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Gm18194-201ENSMUST00000210455 481 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav8n-2A0A075B633 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm12025-201ENSMUST00000117768 144 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm15951-201ENSMUST00000118377 400 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm14905-201ENSMUST00000122351 639 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm24627-201ENSMUST00000122764 138 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm27718-201ENSMUST00000183721 86 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gm25810-201ENSMUST00000082752 108 ntBASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav8n-2A0A075B633 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm25376-201ENSMUST00000104340 133 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm12149-201ENSMUST00000117511 654 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm13873-201ENSMUST00000119208 427 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm6762-201ENSMUST00000121769 289 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm13868-201ENSMUST00000122411 294 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm7634-201ENSMUST00000185778 553 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm6947-201ENSMUST00000186254 78 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm37219-201ENSMUST00000192036 926 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm37193-201ENSMUST00000193087 513 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm37575-201ENSMUST00000195467 309 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm45034-201ENSMUST00000206831 482 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm45189-201ENSMUST00000208567 363 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm45317-201ENSMUST00000210385 223 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Trav8n-2A0A075B633 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trav8n-2A0A075B633 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.24□□□□□ -1.89
Trav8n-2A0A075B633 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trav8n-2A0A075B633 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms