Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H2afb2S4R1M3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
H2afb2S4R1M3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
H2afb2S4R1M3 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.6□□□□□ -1.83
H2afb2S4R1M3 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm15001-201ENSMUST00000117657 795 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm11890-201ENSMUST00000119585 417 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm6584-201ENSMUST00000119671 447 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm11260-201ENSMUST00000121163 942 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm11575-201ENSMUST00000122243 228 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm26171-201ENSMUST00000158422 131 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm26460-201ENSMUST00000175061 126 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm14527-201ENSMUST00000179300 639 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm28010-201ENSMUST00000179485 126 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm25120-201ENSMUST00000180148 79 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm17935-201ENSMUST00000196649 772 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm45189-201ENSMUST00000208567 363 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm45539-201ENSMUST00000210313 428 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm45710-201ENSMUST00000212847 215 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm22043-201ENSMUST00000082993 158 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm25581-201ENSMUST00000083410 164 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.59□□□□□ -1.83
H2afb2S4R1M3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Mir804-201ENSMUST00000103251 95 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm11408-201ENSMUST00000117889 519 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm1866-201ENSMUST00000120701 477 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm11344-201ENSMUST00000122011 335 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm4725-201ENSMUST00000151048 587 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm23205-201ENSMUST00000158671 103 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm3454-201ENSMUST00000185571 412 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm18429-201ENSMUST00000198707 421 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm45551-201ENSMUST00000211459 928 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm45327-201ENSMUST00000211612 565 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm6369-201ENSMUST00000069626 412 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb2S4R1M3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Mir690-201ENSMUST00000102110 109 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm11673-201ENSMUST00000117846 331 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm12358-201ENSMUST00000121842 520 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm23959-201ENSMUST00000157208 324 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm25185-201ENSMUST00000157754 96 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm23084-201ENSMUST00000157850 114 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm2966-201ENSMUST00000166052 481 ntBASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
H2afb2S4R1M3 Gm17204-201ENSMUST00000167936 478 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms