Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm14901-201ENSMUST00000119001 283 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm14788-201ENSMUST00000119457 375 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm14876-201ENSMUST00000120795 327 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm20672-201ENSMUST00000176605 261 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21842-201ENSMUST00000177552 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21626-201ENSMUST00000177791 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21562-201ENSMUST00000177888 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21539-201ENSMUST00000177925 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17522-201ENSMUST00000178144 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21599-201ENSMUST00000178249 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21914-201ENSMUST00000178452 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21723-201ENSMUST00000178692 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21916-201ENSMUST00000178771 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21801-201ENSMUST00000178865 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21633-201ENSMUST00000178941 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17412-201ENSMUST00000179261 468 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21821-201ENSMUST00000179646 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21588-201ENSMUST00000180074 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21780-201ENSMUST00000180128 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21572-201ENSMUST00000180134 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21529-201ENSMUST00000180175 498 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm29370-202ENSMUST00000187476 499 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm43217-201ENSMUST00000199513 367 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm17917-201ENSMUST00000218561 953 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm22979-201ENSMUST00000082609 159 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm25004-201ENSMUST00000083811 161 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm25539-201ENSMUST00000116886 122 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm12982-201ENSMUST00000117408 190 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm6265-201ENSMUST00000149263 231 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm27762-201ENSMUST00000183417 109 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm7634-201ENSMUST00000185778 553 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm37111-201ENSMUST00000193250 634 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn8aQ9WTU3 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm12358-201ENSMUST00000121842 520 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm7855-201ENSMUST00000137737 687 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm18520-201ENSMUST00000174783 658 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm23617-201ENSMUST00000175410 95 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm45409-201ENSMUST00000211486 252 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Gm7948-201ENSMUST00000212607 844 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.21□□□□□ -1.89
Scn8aQ9WTU3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm11260-201ENSMUST00000121163 942 ntBASIC3.21□□□□□ -1.9
Scn8aQ9WTU3 Gm24690-201ENSMUST00000157759 97 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms