Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm26273-201ENSMUST00000104180 131 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm8244-201ENSMUST00000121254 264 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm13973-201ENSMUST00000121371 894 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm11645-201ENSMUST00000121589 649 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm11692-201ENSMUST00000122121 902 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm26148-201ENSMUST00000157430 68 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm23098-201ENSMUST00000157552 299 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm23753-201ENSMUST00000157575 149 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm24745-201ENSMUST00000157840 85 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm24734-201ENSMUST00000158860 262 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm22120-201ENSMUST00000175590 70 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm28594-201ENSMUST00000187022 661 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm29334-201ENSMUST00000190334 357 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm45063-201ENSMUST00000203726 472 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm7540-201ENSMUST00000219764 926 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm25200-201ENSMUST00000083094 130 ntBASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim3Q9R1R2 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trim3Q9R1R2 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm23271-201ENSMUST00000104052 124 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm25169-201ENSMUST00000104190 129 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm15382-201ENSMUST00000118011 537 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm14599-201ENSMUST00000120469 474 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm22036-201ENSMUST00000157279 215 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm10067-201ENSMUST00000179462 348 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm5731-201ENSMUST00000190969 481 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm17935-201ENSMUST00000196649 772 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm43814-201ENSMUST00000197851 413 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm18944-201ENSMUST00000207672 643 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm8785-201ENSMUST00000220259 487 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm25481-201ENSMUST00000083221 158 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim3Q9R1R2 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Gm23256-201ENSMUST00000102235 110 ntBASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Gm26140-201ENSMUST00000103807 110 ntBASIC3.57□□□□□ -1.84
Trim3Q9R1R2 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Gm14050-201ENSMUST00000117052 346 ntBASIC3.57□□□□□ -1.84
Trim3Q9R1R2 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms