Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Mir1907-201ENSMUST00000122509 90 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.65□□□□□ -1.5
Nubp1Q9R060 Gm22210-201ENSMUST00000158101 144 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nubp1Q9R060 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.65□□□□□ -1.5
Nubp1Q9R060 Mir7661-201ENSMUST00000197023 61 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Mir3535-201ENSMUST00000197651 147 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nubp1Q9R060 Gm44984-201ENSMUST00000207802 394 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Gm18016-201ENSMUST00000216119 801 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Gm18921-201ENSMUST00000221798 366 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Mir10a-201ENSMUST00000083585 110 ntBASIC5.65□□□□□ -1.5
Nubp1Q9R060 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nubp1Q9R060 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.65□□□□□ -1.51
Nubp1Q9R060 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nubp1Q9R060 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nubp1Q9R060 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm24423-201ENSMUST00000101982 106 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm25915-201ENSMUST00000104265 126 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm13114-201ENSMUST00000117605 106 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm6884-201ENSMUST00000119318 615 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm14581-201ENSMUST00000121726 198 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm26479-201ENSMUST00000122620 106 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm25390-201ENSMUST00000157341 103 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm25654-201ENSMUST00000158467 88 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm23474-201ENSMUST00000158884 75 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Mir3572-201ENSMUST00000175549 86 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm24167-201ENSMUST00000177733 124 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm24028-201ENSMUST00000178991 124 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm4845-201ENSMUST00000179202 562 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm27018-201ENSMUST00000181136 225 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm44844-201ENSMUST00000207242 336 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm22061-201ENSMUST00000082557 107 ntBASIC5.64□□□□□ -1.51
Nubp1Q9R060 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nubp1Q9R060 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm650-201ENSMUST00000144428 1551 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm13137-201ENSMUST00000118035 345 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm14037-201ENSMUST00000120576 313 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm14875-201ENSMUST00000120881 319 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm23408-201ENSMUST00000158523 265 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm24487-201ENSMUST00000178017 63 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm25450-201ENSMUST00000179144 107 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm27245-201ENSMUST00000184385 376 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Mir6372-201ENSMUST00000185114 109 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm19123-201ENSMUST00000190716 651 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm36935-201ENSMUST00000192526 292 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms