Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm12573-201ENSMUST00000118158 286 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm15497-201ENSMUST00000119137 551 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm16016-201ENSMUST00000120831 550 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm12540-201ENSMUST00000121938 319 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm23434-201ENSMUST00000157179 100 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm24015-201ENSMUST00000157725 232 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm20480-201ENSMUST00000173953 250 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm7909-201ENSMUST00000182688 614 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm43048-201ENSMUST00000196101 388 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm19761-201ENSMUST00000205372 391 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm19196-201ENSMUST00000209258 357 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 AC153864.2-201ENSMUST00000220424 292 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm26446-201ENSMUST00000082455 103 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm7312-201ENSMUST00000118798 469 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm11804-201ENSMUST00000121663 468 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm5353-201ENSMUST00000139800 793 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm24175-201ENSMUST00000158931 129 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm10136-201ENSMUST00000183196 435 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Igkv2-113-201ENSMUST00000196138 362 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 AC239878.1-201ENSMUST00000224212 506 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 AC126440.1-201ENSMUST00000227098 349 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm24036-201ENSMUST00000082868 156 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Msh5Q9QUM7 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm16073-201ENSMUST00000116032 517 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm12842-201ENSMUST00000117298 476 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm11445-201ENSMUST00000119101 532 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Mir5617-201ENSMUST00000176786 57 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm28685-201ENSMUST00000187545 1101 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm28973-201ENSMUST00000189310 613 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Mir721-201ENSMUST00000200230 88 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm45860-201ENSMUST00000212700 334 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 AC157476.1-201ENSMUST00000215555 169 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Msh5Q9QUM7 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms