Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm8807-201ENSMUST00000179328 492 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm27392-201ENSMUST00000185041 101 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 LOC667541-201ENSMUST00000223408 278 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm12582-201ENSMUST00000030555 697 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm14771-201ENSMUST00000118249 203 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm15026-201ENSMUST00000119219 458 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm11625-201ENSMUST00000119535 296 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm12335-201ENSMUST00000119738 327 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm11876-201ENSMUST00000120002 269 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm14656-201ENSMUST00000120342 502 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm13973-201ENSMUST00000121371 894 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm23671-201ENSMUST00000157472 103 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm23592-201ENSMUST00000157859 117 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm17091-201ENSMUST00000163248 357 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm42832-201ENSMUST00000196361 745 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm43415-201ENSMUST00000201934 750 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm44583-201ENSMUST00000207478 281 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm4036-201ENSMUST00000220842 626 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm8231-201ENSMUST00000221617 783 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm25480-201ENSMUST00000083217 133 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Lima1Q9ERG0 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm6461-201ENSMUST00000120015 633 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm15244-201ENSMUST00000121122 130 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm12998-201ENSMUST00000122445 789 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm22034-201ENSMUST00000157283 134 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm23666-201ENSMUST00000158053 116 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm37495-201ENSMUST00000194590 264 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm17781-201ENSMUST00000195232 649 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr480-201ENSMUST00000071658 1029 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Lima1Q9ERG0 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm12427-201ENSMUST00000117719 302 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm12230-201ENSMUST00000118301 454 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm13167-201ENSMUST00000118554 578 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm11233-201ENSMUST00000122357 634 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms