Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm8939-201ENSMUST00000192577 964 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Gm37399-201ENSMUST00000195224 416 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.65□□□□□ -1.5
Upf1Q9EPU0 AC192333.1-201ENSMUST00000224573 376 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 AC144628.2-201ENSMUST00000227374 352 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Gm23378-201ENSMUST00000082942 107 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Gm23503-201ENSMUST00000083903 107 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.65□□□□□ -1.5
Upf1Q9EPU0 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.65□□□□□ -1.51
Upf1Q9EPU0 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.65□□□□□ -1.51
Upf1Q9EPU0 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upf1Q9EPU0 Gm37630-201ENSMUST00000194210 1456 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm14142-201ENSMUST00000117833 296 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm12423-201ENSMUST00000118334 135 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm23782-201ENSMUST00000157939 120 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm26335-201ENSMUST00000178449 107 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm28471-201ENSMUST00000185994 615 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm18291-201ENSMUST00000190791 301 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm37658-201ENSMUST00000192672 315 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm38270-201ENSMUST00000192721 407 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm43975-201ENSMUST00000203023 481 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC116589.3-202ENSMUST00000221770 649 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC116589.6-201ENSMUST00000222252 649 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm22229-201ENSMUST00000082987 108 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf1Q9EPU0 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.64□□□□□ -1.51
Upf1Q9EPU0 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm11698-201ENSMUST00000117948 455 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm9225-201ENSMUST00000121921 836 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm23837-201ENSMUST00000122656 286 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm24507-201ENSMUST00000157683 134 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm16134-201ENSMUST00000161714 336 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms