Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm26746-201ENSMUST00000181722 487 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm27189-201ENSMUST00000184119 190 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm29534-201ENSMUST00000187328 382 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm5731-201ENSMUST00000190969 481 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm45245-201ENSMUST00000210082 376 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm7540-201ENSMUST00000219764 926 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm13155-201ENSMUST00000119277 646 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm14776-201ENSMUST00000121029 887 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm8178-201ENSMUST00000121570 646 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm12358-201ENSMUST00000121842 520 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm5392-201ENSMUST00000122189 789 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm23540-201ENSMUST00000157543 164 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdc40Q9DC48 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.4□□□□□ -1.86
Cdc40Q9DC48 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Cdc40Q9DC48 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cdc40Q9DC48 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Cdc40Q9DC48 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.4□□□□□ -1.86
Cdc40Q9DC48 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm23697-201ENSMUST00000103897 110 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm25272-201ENSMUST00000104293 128 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm11746-201ENSMUST00000119843 821 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm12873-201ENSMUST00000119988 422 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm11387-201ENSMUST00000120266 772 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm14739-201ENSMUST00000120424 802 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm22036-201ENSMUST00000157279 215 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm24314-201ENSMUST00000158274 123 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm28594-201ENSMUST00000187022 661 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm44355-201ENSMUST00000200417 104 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm44475-201ENSMUST00000204041 424 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm8785-201ENSMUST00000220259 487 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm25810-201ENSMUST00000082752 108 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Gm24147-201ENSMUST00000082763 144 ntBASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cdc40Q9DC48 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms