Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm12125-201ENSMUST00000117261 736 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm11913-201ENSMUST00000119094 336 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm3470-201ENSMUST00000160819 420 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Mir7062-201ENSMUST00000185038 66 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28872-201ENSMUST00000191518 158 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm36985-201ENSMUST00000195595 379 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm20074-201ENSMUST00000208144 484 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm9712-201ENSMUST00000210842 311 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm9765-201ENSMUST00000043170 321 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm25581-201ENSMUST00000083410 164 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm12982-201ENSMUST00000117408 190 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm5123-201ENSMUST00000121905 837 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm16471-201ENSMUST00000121940 618 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm5755-201ENSMUST00000152394 837 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm24739-201ENSMUST00000158855 292 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Mir6993-201ENSMUST00000184912 65 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28574-201ENSMUST00000185757 699 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28781-201ENSMUST00000185760 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28339-201ENSMUST00000185845 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29062-201ENSMUST00000186032 694 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28828-201ENSMUST00000186601 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28057-201ENSMUST00000186603 615 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28148-201ENSMUST00000186924 697 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28255-201ENSMUST00000187101 694 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29307-201ENSMUST00000187367 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28397-201ENSMUST00000187970 699 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28896-201ENSMUST00000188609 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29545-201ENSMUST00000188878 694 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29339-201ENSMUST00000189613 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29366-201ENSMUST00000190481 699 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29407-201ENSMUST00000191468 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm37433-201ENSMUST00000192695 678 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm18900-201ENSMUST00000193218 584 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm37441-201ENSMUST00000194430 678 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm38107-201ENSMUST00000194873 696 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm19030-201ENSMUST00000194947 552 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm42758-201ENSMUST00000202146 283 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm44059-201ENSMUST00000204048 351 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm44927-201ENSMUST00000207573 716 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm24319-201ENSMUST00000083389 107 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc3Q9D6Y1 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.4□□□□□ -1.86
Ccdc3Q9D6Y1 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.4□□□□□ -1.86
Ccdc3Q9D6Y1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm6797-201ENSMUST00000119440 512 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm12412-201ENSMUST00000121867 328 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm24138-201ENSMUST00000157572 114 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm23116-201ENSMUST00000158481 67 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm17153-201ENSMUST00000171314 490 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22646-201ENSMUST00000175130 115 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm27580-201ENSMUST00000183666 149 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm38283-201ENSMUST00000193041 695 ntBASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc3Q9D6Y1 Gm45367-201ENSMUST00000210171 347 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms